Current issue
Archive
About the Journal
Editorial Board
Journal Insights
Contact us
Publisher
Article Processing Charge
Editorial Policy
Peer Review Process
Publication Ethics
Guidelines
For Authors
For Reviewers
For Editors
Step-by-step Guide to Article Publishing
How to Promote Your Published Article
Reviewers
REVIEW PAPER
Soil microbiome as an essential player in climate change and plant health control: a review
1
Institute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, 20-90 Lublin, Poland
2
Department of Soil Biology, Institute of Soil Science and Land Evaluation, University of Hohenheim, Emil-Wolff-Str. 27, 70599 Stuttgart, Germany
3
Research Faculty of Agriculture, Hokkaido University, Sapporo 060-8685, Japan
4
Department of Agriculture, Food, Environment and Forestry, University of Florence, Piazzale delle Cascine, 28, 50144, Florence, Italy
5
The National Institute of Horticultural Research, Pomologiczna 18, 96-100 Skierniewice, Poland
6
Wrocław University of Environmental and Life Sciences in Wrocław, Norwida 25, 50-375 Wrocław, Poland
7
Institute of Environmental Sciences, Jagiellonian University in Kraków, Gronostajowa 7, 30-387 Kraków, Poland
8
Department of Industrial Microbiology and Biotechnology, University of Łódź, Banacha 12/16, 90-237 Łódź, Poland
Final revision date: 2026-01-23
Acceptance date: 2026-02-06
Publication date: 2026-04-02
Corresponding author
Magdalena Frąc
Department of Soil and Plant System, Institute of Agrophysics, Polish Academy of Sciences, Poland
Department of Soil and Plant System, Institute of Agrophysics, Polish Academy of Sciences, Poland
Int. Agrophys. 2026, 40(2): 221-238
HIGHLIGHTS
- Soil microbiomes boost climate resilience
- Microbial tools combat climate-driven pathogens
- Soil microbiomes enhance vital ecosystem services
KEYWORDS
TOPICS
ABSTRACT
The European Union’s Biodiversity Strategy for 2030 places significant emphasis on sustainable agriculture, including microbes, which play a crucial role in climate change mitigation and in supporting plant health. The strategy aims to put Europe’s biodiversity on the path to recovery by 2030. Soil microbiomes are highly diverse and play a pivotal role in providing ecosystem services that support this diversity, thereby enhancing soil quality and functions such as carbon sequestration, greenhouse gas (GHG) emission mitigation, nutrient cycling, and plant disease control. This review evaluates the incidence of climate change-borne plant pathogens across the world, focusing on the importance of both heat-resistant fungi, which can be either pathogenic or beneficial, and microbiome-based solutions and their effects on soil processes and microbiome status. We explore the interactions between soil and plant microbiomes to regulate plant health, enhance plant resilience, and improve soil quality through microbial supplementation. Furthermore, we examine the necessity for soil health restoration to reverse biodiversity loss.
FUNDING
This paper was supported by the following projects: Horizon Europe Programme, agreement no. Project 101082289 – LEGUMINOSE; The National Centre for Research and Development in Poland in frame of the Project EJP SOIL, Project SOMPACS, contract number EJPSOIL/I/78/SOMPACS/2022; Horizon Europe Programme, agreement no. Project 101157265 – SPIN-FERT; The National Centre for Research and Develop-
ment within the framework of the program OPUS-23, contract number 2022/45/B/NZ9/04254; Preludium Bis-2 2020/39/O/NZ9/03421 and Preludium-21 under grant number 2022/45/N/NZ9/02089 funding by the National Science Centre; Minister of Science and Higher Education in Poland – Science for Society II Programme, project number NdS-II/SP/0263/2024/01. In addition, EK, MH and MF received funding from the European Union’s Horizon 2020 research and innovation program under grant agreement No 677407 (SoilCare project).
CONFLICT OF INTEREST
The authors declare that they have no known competing financial interests or personal relationships that could have influenced the work reported in this paper.
REFERENCES (189)
1.
Abdul Rahman, N.S.N., Abdul Hamid, N.W., Nadarajah, K., 2021. Effects of abiotic stress on soil microbiome. Int. J. Mol. Sci. 22, 9036. https://doi.org/10.3390/ijms22....
2.
Adhya, T.K., Annapurna, K., 2018. Soil microbiology research in the coming decades: Translational Research Opportunities. In: Adhya, T., Lal, B., Mohapatra, B., Paul, D., Das, S. (Eds) Advances in Soil Microbiology: Recent Trends and Future Prospects. Microorganisms for Sustainability 3. Springer, Singapore, https://doi.org/10.1007/978-98....
3.
Akinsanmi, O.A., Mitter, V., Simpfendorfer, S., Backhouse, D., Chakraborty, S., 2004. Identity and pathogenicity of Fusarium spp. isolated from wheat fields in Queensland and Northern New South Wales. Aust. J. Agr. Res. 55, 1, 97. https://doi.org/10.1071/AR0309....
4.
Ali, R.S., Poll, E., Kandeler, E., 2018. Dynamics of soil respiration and microbial communities: Interactive controls of temperature and substrate quality. Soil Biol. Biochem. 127, 60-70. https://doi.org/10.1016/j.soil....
5.
Alori, E.T., Glick, B.R., Babalola, O.O., 2017. Microbial phosphorus solubilization and its potential for use in sustainable agriculture. Front. Microbiol. 8, 971, 1-8. https://doi.org/10.3389/fmicb.....
6.
Bahram, M., Espenberg, M., Pärn, J., Lehtovirta-Morley, L., Anslan, S., Kasak, K., et al., 2022. Structure and function of the soil microbiome underlying N2O emissions from global wetlands. Nature Communications 13, 1430. https://doi.org/10.1038/s41467....
7.
Bakken, L.R., Frostegård, Å., 2017. Sources and sinks for N2O, can microbiologist help to mitigate N2O emission? Environ. Microbiol. 19, 4801-4805. https://doi.org/10.1111/1462-2....
8.
Baldrian, P., 2017. Forest microbiome: diversity, complexity and dynamics. FEMS Microbiol. Rev. 41, 2, 109-130. doi:10.1093/femsre/fuw040.
9.
Bebber, D.P., Ramotowski, M.A.T., Gurr, S.J., 2013. Crop pests and pathogens move polewards in a warming world. Nature Climate Change 3, 11, 985-88. https://doi.org/10.1038/nclima....
10.
Bencze, S., Vida, G., Balla, K., Varga-László, E., Veisz, O., 2013. Response of wheat fungal diseases to elevated atmospheric CO2 level. Cereal Res. Commun. 41, 3, 409-19. http://www.jstor.org/stable/23....
11.
Berg, G., Rybakova, D., Fischer, D., Cernava1, T., Vergès, M.C.C., Charles, T., et al., 2020. Microbiome definition re-visited: old concepts and new challenges. Microbiome 8, 103. https://doi.org/10.1186/s40168....
12.
Birnbaum, C., Hopkins, A.J.M., Fontaine, J.B., Enright, N.J., 2019. Soil fungal responses to experimental warming and drying in a Mediterranean shrubland. Sci. Total Environ. 683, 524-536. doi: 10.1016/j.scitotenv.2019.05.222.
13.
Bona, E., Massa, N., Toumatia, O., Novello, G., Cesaro, P., Todeschini, V., Boatti, L., Mignone, F., Titouah, H., Zitouni, A., Lingua, G., et al., 2021. Climatic zone and soil properties determine the biodiversity of the soil bacterial communities associated to native plants from desert areas of North-Central Algeria. Microorganisms 9, 1359. https:// doi.org/10.3390/microorganisms9071359.
14.
Borgen, S.K., Hylen, G., 2013. Emissions and methodologies for cropland and grassland used in the norwegian national greenhouse gas inventory. Report 11/2013 from the Climate Center Norwegian Forest and Landscape Institute. ISBN: 978-82-311-0190-1.
15.
Boros-Lajszner, E., Wyszkowska, J., Borowik, A., Kucharski, J., 2021. The Response of the soil microbiome to contamination with cadmium, cobalt and nickel in soil sown with Brassica napus. Minerals 11, 498. https://doi.org/10.3390/min110....
16.
Bremer, C., Braker, G., Matthies, D., Reuter, A., Engels, C., Conrad, R., 2007. Impact of plant functional group, plant species, and sampling time on the composition of nirK-type denitrifier communities in soil. Appl. Environ. Microbiol. 73, 6876-6884. DOI: 10.1128/AEM.01536-07.
17.
Briones, A.M., Okabe, S., Umemiya, Y., Ramsing, N., Reichardt, W., Okuyama, H., 2002. Influence of different cultivars on populations of ammonia-oxidizing bacteria in the root environment of rice. Appl. Environ. Microbiol. 68, 3067-3075. DOI: 10.1128/AEM.68.6.3067-3075.2002.
18.
Brito, V.D., Achimón, F., Zunino, M.P., Zygadlo, J.A., Pizzolitto, R.P., 2022. Fungal diversity and mycotoxins detected in maize stored in silo‐bags: A Review. J. Sci. Food Agric. 102, 7, 2640-2650. https://doi.org/10.1002/jsfa.1....
19.
Bru, D., Sarr, A., Philippot, L., 2007. Relative abundances of proteobacterial membrane-bound and periplasmic nitrate reductases in selected environments. Appl. Environ. Microbiol. 73, 5971-5974. https://doi.org/http://dx.doi.....
20.
Bulgari, R., Franzoni, G., Ferrante, A., 2019. Biostimulants application in horticultural crops under abiotic stress conditions. Agronomy 9, 6, 306. doi:10.3390/agronomy9060306.
21.
Cao, J., Wang, H., Holden, N.M., Adamowski, J.F., Biswas, A., Zhang, X., et al., 2021. Soil properties and microbiome of annual and perennial cultivated grasslands on the Qinghai-Tibetan Plateau. Land Degrad. Dev. 32, 18, 5306-5321. https://doi.org/10.1002/ldr.41....
22.
Carozzi, M., Martin, R., Klumpp, K., Massad, R.S., 2022. Effects of climate change in the European croplands and grasslands: productivity, GHG balance and soil carbon storage. Biogeosci. 19, 12, 3021-3050. https://doi.org/10.5194/bg-202....
23.
Castellano-Hinojosa, A., González-López, J., Bedmar, E.J., 2018. Distinct effect of nitrogen fertilisation and soil depth on nitrous oxide emissions and nitrifiers and denitrifiers abundance. Biol. Fertil. Soils 54, 829-840. https://doi.org/10.1007/s00374....
24.
Chaloner, T.M., Gurr, S.J., Bebber, D.P., 2021. Plant pathogen infection risk tracks global crop yields under climate change. Nat. Clim. Chang. 11, 710-715. https://doi.org/10.1038/s41558....
25.
Chaloner, T.M., Gurr, S.J., Bebber, D.P., 2020. Geometry and evolution of the ecological niche in plant-associated microbes. Nature Communications 11, 1, 1-9. https://doi.org/10.1038/s41467....
26.
Chaparro, J.M., Sheflin, A.M., Manter, D.K., Vivanco, J.M., 2012. Manipulating the soil microbiome to increase soil health and plant fertility. Biol. Fertil. Soils 48, 489-499. https://doi.org/10.1007/s00374....
27.
Chen, L., Redmile-Gordon, M., Li J., Zhang, J., Xin, X., Zhang, C., et al., 2019. Linking cropland ecosystem services to microbiome taxonomic composition and functional composition in a sandy loam soil with 28-year organic and inorganic fertilizer regimes. Appl. Soil Ecol. 139, 1-9, https://doi.org/10.1016/j.apso....
28.
Zhao, C., Liu, B., Piao, S., Wang, X., Lobell, D.B., Huang, Y., et al., 2017. Temperature increase reduces global yields of major crops in four independent estimates. PNAS Agricult. Sci. 114, 35, 9326-9331, https://doi.org/10.1073/pnas.1....
29.
Clemmensen, K.E., Finlay, R.D., Dahlberg, A., Stenlid, J., Wardle, D.A., Lindahl, B.D., 2015. Carbon sequestration is related to mycorrhizal fungal communityshifts during long-term succession in boreal forests. New Phytol. 205, 1525-1536. https://doi.org/10.1111/nph.13....
30.
Coban, O., De Deyn, G.B., van der Ploeg, M., 2022. Soil microbiota as game-changers in restoration of degraded lands. Science 375, 990, https://doi.org/10.1126/scienc....
31.
Coleman-Derr, D., Tringe, S.G., 2014. Building the crops of tomorrow: advantages of symbiont-based approaches to improving abiotic stress tolerance. Front. Microbiol. 5, 283, 1-6. doi: 10.3389/fmicb.2014.00283.
32.
Compant, S., van der Heijden, M.G.A., Sessitsch, A., 2010. Climate change effects on beneficial plant – microorganism interactions. FEMS Microbiol. Ecol. 73, 197-214. DOI: 10.1111/j.1574-6941.2010.00900.x.
33.
Crotty, F., Hannula, E., Hallama, M., Kandeler, E., 2022. Can soil improving cropping systems reduce the loss of soil biodiversity within agricultural soils? In: Reyes-Sánchez L.B., Horn R., Costantini E.A.C.: Sustainable soil management as a key to preserving soil biodiversity and stopping its degradation. International Union of Soil Sciences (IUSS). Vienna, Austria, 187-220.
34.
Crowther, T.W., Tood-Brown, K.E.O., Rowe, C.W., Wieder, W.R., Carey, J.C., Machmuller, M.B., et al., 2016. Quantifying global soil carbon losses in response to warming. Nature 540, 104-108. https://doi.org/10.1038/nature....
35.
Damianidis, D., Ortiz, B.V., Bowen, K.L., Windham, G.L., Hoogenboom, G., Hagan, A., et al., 2018. Minimum temperature, rainfall, and agronomic management impacts on corn grain aflatoxin contamination. Agron. J. 110, 5, 1697-1708. https://doi.org/10.2134/agronj....
36.
Day, N.J., Cumming S.G., Dunfield K.E., Johnstone J.F., Mack M.C., Reid K.A., Turetsky M.R., et al., 2020. Identifying functional impacts of heat-resistant fungi on boreal forest recovery after wildfire. Front. For. Glob. Change 3, 68. doi: 10.3389/ffgc.2020.00068.
37.
Debode, J., Van Hemelrijck, W., Heungens, K., Maes, M., Creemers, P., 2011. First report of Pilidium concavum causing tan-brown rot on strawberry fruit in Belgium. Plant Dis. 95, 8, 1029. doi: 10.1094/PDIS-10-10-0752.
38.
Delgado-Baquerizo, M., Guerra, C.A., Cano-Díaz, C., Egidi, E., Wang, J.T., Eisenhauer, N., et al., 2020. The proportion of soil-borne pathogens increases with warming at the global scale. Nat. Clim. Change 10, 6, 550-54. https://doi.org/10.1038/s41558....
39.
Deng, X., Zhang, N., Shen, Z., Zhu, C., Liu, H., Xu, Z., et al., 2021. Soil microbiome manipulation triggers direct and possible indirect suppression against Ralstonia solanacearum and Fusarium oxysporum. npj Biofil. Microbio. 7, 33. https://doi.org/10.1038/s41522....
40.
Drobek, M., Frąc, M., Cybulska, J., 2019. Plant Biostimulants: Importance of the quality and yield of horticultural crops and the improvement of plant tolerance to abiotic stress. – A Review, Agronomy 9, 335. https://doi.org/10.3390/agrono....
41.
Drobek, M., Frąc, M., Zdunek, A., Cybulska, J., 2020. The effect of cultivation method of strawberry (Fragaria x ananassa Duch.) cv. honeoye on structure and degradation dynamics of pectin during cold storage. Molecules 25, 4325. doi:10.3390/molecules25184325.
42.
EASAC, 2022. Regenerative agriculture in Europe: A critical analysis of contributions to European Union Farm to Fork and Biodiversity Strategies. European Academies Science Advisory Council, policy report 44, April 2022, 1-70, ISBN: 978-3-8047-4372-4, www.easac.eu.
43.
Elias, F., Woyessa, D., Muleta, D., 2016. Phosphate solubilization potential of rhizosphere fungi isolated from plants in Jimma zone, Southwest Ethiopia. Int. J. Microbiol. 54726, 1-11. https://doi.org/10.1155/2016/5....
44.
Eltbany, N., Baklawa, M., Ding, G.C., Nassal, D., Weber, N., Kandeler, E., et al., 2019. Enhanced tomato plant growth in soil under reduced P supply through microbial inoculants and microbiome shifts. FEMS Microbiol. Ecol. 95, 9, fiz124. https://doi.org/10.1093/femsec....
45.
European Commission, 2020. Directorate-General for Research and Innovation, soils are healthy by 2030 for healthy food, people, nature and climate: interim report of the mission board for soil health and food, publications office. https://doi.org/10.2777/918775.
46.
Fahim, M.A., Hassanein, M.K., Abou Hadid, A.F., Kadah, M.S., 2011. Impacts of climate change on the widespread and epidemics of some tomato diseases during the last decade in Egypt. Acta Horticult. 914, 317-320. DOI:10.17660/ActaHortic.2011.914.57.
47.
Farquharson, E.A., Ballard, R.A., 2010. Improving N2 fixation from the plant down: compatibility of Trifolium subterraneum L. cultivars with soil rhizobia can influence symbiotic performance. Plant Soil, 327, 261-277. https://doi.org/10.1007/s1110 4-009-0052-8.
48.
Food and Agriculture Organization of the United Nations (FAO) and ITPS, 2021. Recarbonizing Global Soils - A technical manual of recommended sustainable soil management. Volume 3: Cropland, Grassland, Integrated systems, and farming approaches – Practices Overview. https://doi.org/10.4060/cb6595....
49.
Fazeli-Nasab, B., Sayyed, R.Z., 2019. Plant growth-promoting rhizobacteria and salinity stress: A journey into the soil. In: Plant Growth Promoting Rhizobacteria for Sustainable Stress Management; Springer: Singapore, 21-34. https://doi.org/10.1007/978-98....
50.
Fornal, E., Parfieniuk, E., Czeczko, R., Bilinska-Wielgus, N., Frac, M., 2017. Fast and easy liquid chromatography-mass spectrometry method for evaluation of postharvest fruit safety by determination of mycotoxins: Fumitremorgin C and verruculogen. Postharv. Biol. Technol. 131, 46-54. http://dx.doi.org/10.1016/j.po....
51.
Frąc, M., Lipiec, J., Usowicz, B., Oszust, K., Brzezinska, M.. 2020. Structural and functional microbial diversity of sandy soil under cropland and grassland. PeerJ 8:e9501. https://doi.org/10.7717/peerj.....
52.
Frąc, M., 2019. Microbial biodiversity – importance and risks (in Polish). In: Soil biodiversity protection for the health of present and future generations (in Polish). IUNG-PIB, Puławy, Poland, ISBN 978-83-7562-318-5.
53.
Frąc, M., Kaczmarek, J., Jędryczka, M., 2022. Metabolic Capacity differentiates plenodomus lingam from P. biglobosus subclade ‘brassicae’, the causal agents of phoma leaf spotting and stem canker of oilseed rape (Brassica napus) in Agricultural Ecosystems. Pathogens 11, 50. https://doi.org/10.3390/pathog....
54.
Frąc, M., Hannula, S.E., Belka, M., Jędryczka, M., 2018. Fungal biodiversity and their role in soil health. Front. Microbiol. 9, 707. https://doi.org/10.3389/fmicb.....
55.
Frąc, M., Jezierska-Tys, S., Yaguchi, T., 2015. Occurrence, detection, and molecular and metabolic characterization of heat-resistant fungi in soils and plants and their risk to human health. Adv. Agron. 132, 161-204. https://doi.org/10.1016/bs.agr....
56.
Francis, C.A., Roberts, K.J., Beman, J.M., Santoro, A.E., Oakley, B.B., 2005. Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean. Proc. Natl. Acad. Sci. U. S. A. 102, 14683-14688. https://doi.org/http://dx.doi.....
57.
Geisen, S., 2021. The future of (soil) microbiome studies: current limitations, integration, and perspectives. mSystems 6:e00613-21. https://doi.org/10.1128/mSyste....
58.
Ghini, R., Hamada, E., Pedro Júnior, M.J., Gonçalves, R.R.V., 2011. Incubation period of Hemileia vastatrix in coffee plants in Brazil simulated under climate change. Summa Phytopathol. 37, 85-93. https://doi.org/10.1590/S0100-....
59.
Glassman, S.I., Levine, C.R., DiRocco, A.M., Battles, J.J., Bruns, T.D., 2016. Ectomycorrhizal fungal spore bank recovery after a severe forest fire: some like it hot. ISME J. 10, 1228-1239. https://doi.org/10.1038/ismej.....
60.
Gryta, A., Frąc, M., Oszust, K., 2019. Community shift in structure and functions across soil profile in response to organic waste and mineral fertilization strategies. Appl. Soil Ecol. 143, 55-60. https://doi.org/10.1016/j.apso....
61.
Gryta, A., Frąc, M., Oszust, K., 2020. Genetic and metabolic diversity of soil microbiome in response to exogenous organic matter amendments. Agronomy 10, 546, https://doi.org/10.3390/agrono....
62.
Guerret, M.G.L., Barbetti, M.J., You, M.P., Jones, R.A.C., 2016. Effects of temperature on disease severity in plants of subterranean clover infected singly or in mixed infection with bean yellow mosaic virus and kabatiella caulivora. J. Phytopathol. 164, 9, 608-19. https://doi.org/10.1111/jph.12....
63.
Hallama, M., Pekrun, C., Lambers, H., Kandeler, E., 2019. Hidden miners – the roles of cover crops and soil microorganisms in phosphorus cycling through agroecosystems. Plant Soil 434, 7-45. https://doi.org/10.1007/s11104....
64.
Hallama, M., Pekrun, C., Mayer-Gruner, P., Uksa, M., Abdullaeva, Y., Pilz, S., Schloter, M., Lambers, H., Kandeler, E., 2022. The role of microbes in the increase of organic phosphorus availability in the rhizosheath of cover crops. Plant Soil https://doi.org/10.1007/s11104....
65.
Hallama, M., Pekrun, C., Pilz, S., Jarosch, K.A., Frac, M., Uksa, M., et al., 2021. Interactions between cover crops and soil microorganisms increase phosphorus availability in conservation agriculture. Plant Soil 463, 307-328. https://doi.org/10.1007/s11104....
66.
Hamid, B., Zaman, M., Farooq, S., Fatima, S., Sayyed, R.Z., Baba, Z.A., et al., 2021. Bacterial plant biostimulants: A sustainable way towards improving growth, productivity, and health of crops. Sustainability 13, 2856. https://doi.org/10.3390/su1305....
67.
Hannula, S.E., Ma, H., Pérez-Jaramillo, J.E., Pineda, A., Bezemer, T.M., 2020. Structure and ecological function of the soil microbiome affecting plant – soil feedbacks in the presence of a soil-borne pathogen. Environ. Microbiol. 22, 2, 660-676. https://doi.org/10.1111/1462-2....
68.
Hasegawa H., Chatterjee A., Cui Y., Chatterjee A.K., 2005. Elevated temperature enhances virulence of Erwinia carotovora subsp. carotovora strain EC153 to plants and stimulates production of the quorum sensing signal, N-acyl homoserine lactone, and extracellular proteins. Appl. Environ. Microbiol. 71, 4655-4663. https://doi.org/10.1128/AEM.71....
69.
Helfer, S., 2014. Rust Fungi and Global Change. New Phytologist. 201, 3, 770-80. https://doi.org/10.1111/nph.12....
70.
Henry, S., Baudoin, E., López-Gutiérrez, J.C., Martin-Laurent, F., Brauman, A., Philippot, L., 2004. Quantification of denitrifying bacteria in soils by nirK gene targeted real-time PCR. J. Microbiol. Methods 59, 327-335. https://doi.org/http://dx.doi.....
71.
Henry, S., Bru, D., Stres, B., Hallet, S., Philippot, L., 2006. Quantitative detection of the nosZ gene, encoding nitrous oxide reductase, and comparison of the abundances of 16S rRNA, narG, nirK, and nosZ genes in soils. Appl. Environ. Microbiol. 72, 5181-5189. https://doi.org/http://dx.doi.....
72.
Hicks, N., Vik, U., Taylor, P., Ladoukakis, E., Park, J., Kolisis, F., et al., 2017. Using prokaryotes for carbon capture storage. Trends Biotechnol. 35, 22-32. https://doi.org/10.1016/j.tibt....
73.
Hoang, D.T.T., Rashtbari, M., Anh, L.T., Wang, S., Tu, D.T., Hiep, N.V., et al., 2022. Mutualistic interaction between arbuscular mycorrhiza fungi and soybean roots enhances drought resistant through regulating glucose exudation and rhizosphere expansion. Soil Biol. Biochem. 171, 108728. https://doi.org/10.1016/j.soil....
74.
Hofer, U., 2022. Microbiome shift in degrading soil. Nat. Rev. Microbiol. 20, 382. https://doi.org/10.1038/s41579....
75.
Höflich, G., Ruppel, S., 1994. Growth stimulation of pea after inoculation with associative bacteria. Microbiol. Res. 149, 1, 99-104. https://doi.org/10.1016/S0944-....
76.
Huang, Y.J., Evans, N., Li, Z.Q., Eckert, M., Chevre, A.M., Renard, M., et al., 2006. Temperature and leaf wetness duration affect phenotypic expression of Rlm6-Mediated resistance to Leptosphaeria maculans in Brassica napus. New Phytologist. 170, 1, 129-41. https://doi.org/10.1111/j.1469....
77.
Ikeda, S., Ytow, N., Ezura, H., Minamisawa, K., Miyashita, K., Fujimura, T., 2007. Analysis of molecular diversity of bacterial chitinase genes in the maize rhizosphere using culture-independent methods. Microbes Environ. 22, 71-77. https://doi.org/10.1264/jsme2.....
78.
Islam W., Noman A., Naveed H., Huang Z., Chen H.Y.H., 2020. Role of environmental factors in shaping the soil microbiome. Environ. Sci. Poll. Res. 27, 41225-41247. https://doi.org/10.1007/s11356....
79.
Jansson, C., Vogel, J., Hazen, S., Brutnell, T., Mockler, T., 2018. Climate-smart crops with enhanced photosynthesis. J. Exp. Bot. 69, 3801-3809. https://doi.org/10.1093/jxb/er....
80.
Jansson, J.K., Baker, E.S., 2016. A multi-omic future for microbiome studies. Nat. Microbiol. 26, 1, 16049. https://doi.org/10.1038/nmicro....
81.
Jansson, J.K., Hofmockel, K.S., 2018. The soil microbiome – from metagenomics to metaphenomics. Curr. Opin. Microbiol. 43, 162-168. https://doi.org/10.1016/j.mib.....
82.
Jansson, J.K., Hofmockel, K.S., 2020. Soil microbiomes and climate change. Nat. Rev. Microbiol. 18, 35. https://doi.org/10.1038/s41579....
83.
Jin, T., Shimizu, M., Marutani, S., Desyatkin, A.R., Iizuka, N., Hata, H., et al., 2010. Effect of chemical fertilizer and manure application on N2O emission from reed canary grassland in Hokkaido, Japan. Soil Sci. Plant Nutr. 56, 53-65. https://doi.org/10.1111/j.1747....
84.
Jin S., Song Y.N., Deng W.Y., Gordon M.P., Nester E.W., 1993.The regulatory VirA protein of Agrobacterium tumefaciens does not function at elevated temperatures. J Bacteriol. 175, 6830-6835.
85.
Jochum, M.D., McWilliams, K.L., Borrego, E.J., Kolomiets, M.V., Niu, G., Pierson, E.A., et al., 2019. Bioprospecting plant growth-promoting rhizobacteria that mitigate drought stress in grasses. Front. Microbiol. 10, 2106. https://doi.org/10.3389/fmicb.....
86.
Jones, K.E., Patel, N.G., Levy, M.A., Storeygard, A., Balk, D., Gittleman, J.L., et al., 2008. Global trends in emerging infectious diseases. Nature 451(7181), 990-993. https://doi.org/10.1038/nature....
87.
Kaczmarek, J., Kedziora, A., Brachaczek, A., Latunde-Dada, A.O., Dakowska, S., Karg, G., et al., 2016. Effect of climate change on sporulation of the teleomorphs of Leptosphaeria species causing stem canker of brassicas. Aerobiol. 32, 39-51. https://doi.org/10.1007/s10453....
88.
Kandeler, E., Deiglmayr, K., Tscherko, D., Bru, D., Philippot, L., 2006. Abundance of narG, nirS, nirK, and nosZ genes of denitrifying bacteria during primary successions of a glacier foreland. Appl. Environ. Microbiol. 72, 5957-5962. http://dx.doi.org/10.1128/AEM.....
89.
Karas, P.A., Baguelin, C., Pertile, G., Papadopoulou, E.S., Nikolaki, S., Storck, V., et al., 2018. Assessment of the impact of three pesticides on microbial dynamics and functions in a lab-to- field experimental approach. Sci. Total Environ. 637-638, 636-646. https://doi.org/10.1016/j.scit....
90.
Karimi, K., Arzanlou, M., Babai-Ahari, A., Pertot, I., 2016. Biological and molecular characterisation of Pilidium lythri, an emerging strawberry pathogen in Iran. Phytopathol. Mediterr. 553, 366-379. https://doi.org/10.14601/Phyto....
91.
Kashyap, P.L., Rai, P., Srivastava, A.K., Kumar, S., 2017. Trichoderma for climate resilient agriculture. World J. Microbiol. Biotechnol. 33, 155. https://doi.org/10.1007/s11274....
92.
Kim, Y.S., Lee, Y., Cheon, W., Park, J., Kwon, H.T., Balaraju, K., et al., 2021. Characterization of Bacillus velezensis AK-0 as a biocontrol agent against apple bitter rot caused by Colletotrichum gloeosporioides. Sci. Rep. 11, 626. https://doi.org/10.1038/s41598....
93.
Kitamura, R., Sugiyama, C., Yasuda, K., Nagatake, A., Yuan, Y., Du, J., et al., 2021. Effects of three types of organic fertilizers on greenhouse gas emissions in a grassland on andosol in Southern Hokkaido. Japan. Front. Sustain. Food Syst. 5, 49613. https://doi.org/10.3389/fsufs.....
94.
Kloepper, J.W., Beauchamp, C.J., 1992. A review of issues related to measuring colonization of plant roots by bacteria. J. Microbiol. 38, 1219-1232. https://doi.org/10.1139/m92-20....
95.
Komáromi, J., Bencze, S., Varga, B., Vida, G., Veisz, O., 2013. Changes in the Powdery mildew resistance and biomass of wheat genotypes at normal and elevated atmospheric CO2 levels. Acta Agronom. Hung. 61, 4, 247-54. https://doi.org/10.1556/AAgr.6....
96.
Kothe, E., Turnau, K., 2018. Editorial: Mycorrhizosphere communication: Mycorrhizal fungi and endophytic fungus-plant interactions. Front. Microbiol. 9, 3015, https://doi.org/10.3389/fmicb.....
97.
Kubaczyński, A., Walkiewicz, A., Pytlak, A., Grządziel J., Gałązka, A., Brzezińska, M., 2022. Biochar dose determines methane uptake and methanotroph abundance in Haplic Luvisol. Sci. Tot. Environ. 806, 151259. https://doi.org/10.1016/j.scit....
98.
Kumar, M.S., Reddy, G.C., Phogat, M., Korav, S., 2018. Role of bio-fertilizers towards sustainable agricultural development: a review. J. Pharmacogn. Phytochem. 7, 1915-1921.
99.
Kumar, S., Diksha, Sindhu, S.S., Kumar, R., 2022. Biofertilizers: An ecofriendly technology for nutrient recycling and environmental sustainability. Curr. Res. Microb. Sci. 3, 100094. https://doi.org/10.1016/j.crmi....
100.
Kůdela V., 2009. Potential impact of climate change on geographic distribution of plant pathogenic bacteria in central Europe. Plant Protect. Sci., 45, S27-S32.
101.
Lacroix C., 2021. Biodiversity–disease relationships in wild plant communities differentially affected by land use. New Phytologist. 230, 2094-2096. https://doi.org/10.1111/nph.17....
102.
Lal, R., Bouma, J., Brevik, E., Dawson, L., Field, D., Glaser, B., et al., 2021. Soils and sustainable development goals of the United Nations: An International Union of Soil Sciences. Geoderma Regional, 25, e00398. https://doi.org/10.1016/j.geod....
103.
Lal, R., Brevik, E.C., Dawson, L., Field, D., Glaser, B., Hartemink, A.E., et al., 2020. Managing Soils for Recovering from the COVID-19 Pandemic. Soil Syst. 4, 46. https://doi.org/10.3390/soilsy....
104.
Lal, R., 2004. Soil carbon sequestration impacts on global climate change and food security. Science 304, 1623-1627. https://doi.org/10.1126/scienc....
105.
Leach, M.D., Cowen, L.E., 2013. Surviving the heat of the moment: a fungal pathogens perspective. PLoS Pathog. 9, 3, e1003163. https://doi.org/10.1371/journa....
106.
Levy-Booth, D.J., Prescott, C.E., Grayston, S.J., 2014. Microbial functional genes involved in nitrogen fixation, nitrification and denitrification in forest ecosystems. Soil Biol. Biochem. 75, 11-25. https://doi.org/http://dx.doi.....
107.
Lin, J.-L., Radajewski, S., Eshinimaev, B.T., Trotsenko, Y.A., Mcdonald, I.R., Murrell, J.C., 2004. Molecular diversity of methanotrophs in Transbaikal soda lake sediments and identification of potentially active populations by stable isotope probing. Environ. Microbiol. 6, 1049-1060. https://doi.org/10.1111/j.1462....
108.
Lindsay, E.A., Colloff, M.J., Gibb, N.L., Wakelin, S.A., 2010. The abundance of microbial functional genes in grassy woodlands is influenced more by soil nutrient enrichment than by recent weed invasion or livestock exclusion. Appl. Environ. Microbiol. 76, 5547-5555. https://doi.org/10.1128/AEM.03....
109.
Liu, X., Le Roux, X., Falcao-Salles, J., 2022. The legacy of microbial inoculants in agroecosystems and potential for tackling climate change challenges. iScience 25, 103821, 2022. https://doi.org/10.1016/j.isci....
110.
Liu, X., Ma, Z., Cadotte, M.W., Chen, F., He, J.-S., Zhou, S., 2019. Warming affects foliar fungal diseases more than precipitation in a Tibetan Alpine Meadow. New Phytologist. 221, 3, 1574-84. https://doi.org/10.1111/nph.15....
111.
Mącik, M., Gryta, A., Frąc, M., 2020a. Biofertilizers in agriculture: An overview on concepts, strategies and effects on soil microorganisms. Adv. Agron. 162, 31-87. https://doi.org/10.1016/bs.agr....
112.
Mącik, M., Gryta, A., Sas-Paszt, L., Frąc, M., 2020b. The status of soil microbiome as affected by the application of phosphorus biofertilizer: Fertilizer Enriched with Beneficial Bacterial Strains. Int. J. Mol. Sci. 21, 8003. https://doi.org/10.3390/ijms21....
113.
Mącik, M., Gryta, A., Sas‐Paszt, L., Frąc, M., 2022. Composition, activity and diversity of bacterial and fungal communities responses to inputs of phosphorus fertilizer enriched with beneficial microbes in degraded Brunic arenosol. L. Degrad. Dev. 33, 844-865. https://doi.org/10.1002/ldr.41....
114.
Mahmoodabadi M., Heydarpour E., 2014. Sequestration of organic carbon influenced by the application of straw residue and farmyard manure in two different soils. Int. Agrophys. 28, 2, 169-176. https://doi.org/10.2478/intag-....
115.
Malarczyk, D.G., Panek, J., Frąc, M., 2020. Triplex real-time pcr approach for the detection of crucial fungal berry pathogens – Botrytis spp., Colletotrichum spp. and Verticillium spp. Int. J. Mol. Sci. 21, 22, 1-17. https://doi.org/10.3390/ijms21....
116.
Manabe, S., 2019. Role of Greenhouse Gas in Climate Change. Tellus A: Dynamic Meteorol. Oceanogr. 71, 1, 1620078. https://doi.org/10.1080/160008....
117.
Marchesi, J.R., Ravel, J., 2015. The vocabulary of microbiome research: a proposal. Microbiome 3, 31. https://doi.org/10.1186/s40168....
118.
Martinez-Viveros, O., Jorquera, M., Crowley, D., Gajardo, G., Mora, M., 2010. Mechanisms and practical considerations involved in plant growth promotion by rhizobacteria. J. Soil Sci. Plant Nutr. 10, 293-319. http://dx.doi.org/10.4067/S071....
119.
Slavica, M., Cucu, M.A., Garibaldi, A., Gullino, M.L., 2018. Combined effect of CO2 and temperature on wheat powdery mildew development. Plant Pathol. J. 34, 4, 316-26. https://doi.org/10.5423/PPJ.OA....
120.
Miedaner, T., Juroszek P., 2021. Global warming and increasing maize cultivation demand comprehensive efforts in disease and insect resistance breeding in North-Western Europe. Plant Pathol. 70, 5, 1032-46. https://doi.org/10.1111/ppa.13....
121.
Milus, E.A., Kristensen, K., Hovmøller, M.S., 2009. Evidence for increased aggressiveness in a recent widespread strain of Puccinia striiformis f. Sp. tritici causing stripe rust of wheat. phytopathol. 99, 1, 89-94. https://doi.org/10.1094/PHYTO-....
122.
Minasny, B., Malone, B.P., McBratney, A.B., Angers, D.A., Arrouays, D., Chambers, A., et al., 2017. Soil carbon 4 per mille. Geoderma 292, 59-86. https://doi.org/10.1016/j.geod....
123.
Mukumbuta, I., Shimizu, M., Jin, T., Nagatake, A., Hata, H., Kondo, S., et al., 2017. Nitrous and nitric oxide emissions from a cornfield and managed grassland: 11 years of continuous measurement with manure and fertilizer applications, and land-use change. Soil Sci. Plant Nutr. 63, 185-199. https://doi.org/10.1080/003807....
124.
Mukumbuta, I., Uchida, Y., Hatano, R., 2018. Evaluating the effect of liming on N2O fluxes from denitrification in an Andosol using the acetylene inhibition and 15N isotope tracer methods. Biol. Fertil. Soils 54, 71-81. https://doi.org/10.1007/s00374....
125.
Nagatake, A., Mukumbuta, I., Yasuda, K., Shimizu, M., Kawai, M., Hatano, R., 2018. Temporal dynamics of nitrous oxide emission and nitrate leaching in renovated grassland with repeated application of manure and/or chemical fertilizer. Atmosphere 9, 485. https://doi.org/10.3390/atmos9....
126.
Naser, H.M., Nagata, O., Tamura, S., Hatano, R., 2007. Methane emissions from five paddy fields with different amount of rice straw application in central Hokkaido, Japan. Soil Sci. Plant Nutr. 53, 95-101. https://doi.org/10.1111/j.1747....
127.
Nassal, D., Spohn, M., Eltbany, N., Jacquiod, S., Smalla, K., Marhan, S., et al., 2018. Effects of phosphorus-mobilizing bacteria on tomato growth and soil microbial activity. Plant Soil 427, 17-37. https://doi.org/10.1007/s11104....
128.
Naylor, D., Sadler, N., Bhattacharjee, A., Graham, E.B., Anderton, C.R., McClure, R., et al., 2020. Soil microbiomes under climate change and implications for carbon Cycling. Ann. Rev. Environ. Res. 45, 29-59. https://doi.org/10.1146/annure....
129.
Nie, Y.X., Li, L., Isoda, R., Wang, M.C., Hatano, R., Hashidoko, Y., 2016. Physiological and genotypic characteristics of nitrous oxide (N2O)-emitting pseudomonas species isolated from dent corn Andisol farmland in Hokkaido, Japan. Microb. Environ. 31, 2, 93-103. https://doi.org/10.1264/jsme2.....
130.
O’Callaghan, M., Ballard, R.A., Wright, D., 2022. Soil microbial inoculants for sustainable agriculture: Limitations and opportunities. Soil Use and Management, 38, 1340-1369. https://doi.org/10.1111/sum.12....
131.
Oehme, V., Högy, P., Franzaring, J., Zebitz, C.P.W., Fangmeier, A., 2013. Pest and disease abundance and dynamics in wheat and oilseed rape as affected by elevated atmospheric CO2 concentrations. Function. Plant Biol. 40, 2, 125. https://doi.org/10.1071/FP1216....
132.
Oszust, K., Pylak, M., Frąc, M., 2021. Trichoderma-based biopreparation with prebiotics supplementation for the naturalization of raspberry plant rhizosphere. Int. J. Mol. Sci. 22, 6356. https://doi.org/10.3390/ijms.
133.
Pal, S., Singh, H.B., Farooqui, A., Rakshit, A., 2015. Fungal biofertilizers in Indian agriculture: perception, demand and promotion. J. Eco-friendly Agric. 10, 2, 101-113.
134.
Panagos, P., Montanarella, L., Barbero, M., Schneegans, A., Aguglia, L., Jones, A., 2022. Soil priorities in the European Union. Geoderma Reg. 29, e00510. https://doi.org/10.1016/j.geod....
135.
Panek J., Frąc M., Bilińska-Wielgus N., 2016. Comparison of chemical sensitivity of fresh and long-stored heat resistant neosartorya fischeri environmental isolates using BIOLOG Phenotype MicroArray System. PLoS One. 11(1), e0147605. https://doi.org/10.1371/journa....
136.
Pausch, J., Hünninghaus, M., Kramer, S., Scharrobad, A., Scheunemann, N., Butenschoen, O., et al., 2018. Carbon budgets of top- and subsoil food webs in an arable system. Pedobiol. 69, 29-33. https://doi.org/10.1016/j.pedo....
137.
Pertile, G., Frąc, M., Fornal, E., Oszust, K., Gryta, A., Yaguchi, T., 2020. Molecular and metabolic strategies for postharvest detection of heat-resistant fungus Neosartorya fischeri and its discrimination from Aspergillus fumigatus. Postharv. Biol. Technol. 161, 111082. https://doi.org/10.1016/j.post....
138.
Pertile, G., Lamorski, K., Bieganowski, A., Boguta, P., Brzezińska, M., Polakowski, C., et al., 2021. Immediate effects of the application of various fungal strains with urea fertiliser on microbiome structure and functions and their relationships with the physicochemical parameters of two different soil types. Appl. Soil Ecol. 163, 103972. https://doi.org/10.1016/j.apso....
139.
Pieńkowski, G., Hodbod, M., Ullmann, C.V., 2016. Fungal decomposition of terrestrial organic matter accelerated early Jurassic climate warming. Sci. Rep. 6, 1, 31930. https://doi.org/10.1038/srep31....
140.
Pii, Y., Borruso, L., Brusetti, L., Crecchio, C., Cesco, S., Mimmo, T., 2016. The interaction between iron nutrition, plant species and soil type shapes the rhizosphere microbiome. Plant Physiol. Biochem. 99, 39-48. https://doi.org/10.1016/j.plap....
141.
Prashar, P., Kapoor, N., Sachdeva, S., 2014. Rhizosphere: itsstructure, bacterial diversity and significance. Rev. Environ. Sci. Biotechnol. 13, 63-77. https://doi.org/10.1007/s11157....
142.
Pugliese, M., Liu, J., Titone, P., Garibaldi, A., Gullino, M.L., 2012. Effects of elevated CO2 and temperature on interactions of zucchini and powdery mildew. Phytopathol. Mediterr. 51, 3, 480-87. https://doi.org/10.14601/Phyto....
143.
Pylak, M., Oszust, K., Frąc, M., 2019. Review report on the role of bioproducts, biopreparations, biostimulants and microbial inoculants in organic production of fruit. Rev. Environ. Sci. Biotechnol. 18, 597-616. https://doi.org/10.1007/s11157....
144.
Pylak, M., Oszust, K., Panek, J., Frąc, M., 2023. The structural and functional shift in the soil rhizosphere and raspberry shoot microbiomes underlies changes caused by phytopathogens contamination and naturalization strategies implementation. App. Soil Ecol. 186, 104810. https://doi.org/10.1016/j.apso....
145.
Qiu, Z., Egidi, E., Liu, H., Kaur, S., Singh, B.K., 2019. New frontiers in agriculture productivity: optimised microbial inoculants and in situ microbiome engineering. Biotechnology Advances 37, 107371. https://doi.org/10.1016/j.biot....
146.
Radhakrishnan, R., Hashem, A., Abd Allah, E.F., 2017. Bacillus: a biological tool for crop improvement through biomolecular changes in adverse environments. Front. Physiol. 8, 667. https://doi.org/10.3389/fphys.....
147.
Radhapriya, P., Ramachandran, A., Palani, P., 2018. Indigenous plant growth-promoting bacteria enhance plant growth, biomass, and nutrient uptake in degraded forest plants. 3 Biotech. 8, 154. https://doi.org/10.1007/s13205....
148.
Ricciardi, A., Blackburn, T.M., Carlton, J.T., Dick, J.T., Hulme, P.E., Iacarella, J.C., et al., 2017. Invasion science: A horizon scan of emerging challenges and opportunities. Trends in Ecology Evolution 32, 464-474. https://doi.org/10.1016/j.tree....
149.
Rotthauwe, J.-H., Witzel, K.-P., Liesack, W., 1997. The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl. Environ. Microbiol. 63, 4704-4712. https://doi.org/http://dx.doi.....
150.
Sangiorgio, D., Cellini, A., Donati, I., Pastore, C., Onofrietti, C., Spinelli, F., 2020. Facing climate change: Application of microbial biostimulants to mitigate stress in horticultural crops. Agronomy 10, 6, 794. https://doi.org/10.3390/agrono....
151.
Santos, J.L.P., Samapundo, S., Gülay, S.M., Impe, J.V., Sant’Ana, A.S., Devlieghere, F., 2018. Inter- and intra-species variability in heat resistance and the effect of heat treatment intensity on subsequent growth of Byssochlamys fulva and Byssochlamys nivea. Int. J. Food Microbiol. 20, 279, 80-87. https://doi.org/10.1016/j.ijfo....
152.
Sarmast, E., Fallah, A.A., Jafari, T., Khaneghah, A.M., 2021. Occurrence and fate of mycotoxins in cereals and cereal-based products: A narrative review of systematic reviews and meta-analyses studies. Curr. Opin. Food Sci. 39, 68-75. https://doi.org/10.1016/j.cofs....
153.
Sasse, J., Martinoia, E., Northen, T., 2018. Feed your friends: do plant exudates shape the root microbiome? Trends Plant Sci. 23(1), 25-41. https://doi.org/10.1016/j.tpla....
154.
Schaad N.W., 2008. Emerging plant pathogenic bacteria and global warming. In: Fatmi M.B., Collmer A., Iacobellis N.S., Masfield J.W., Murillo J., Schaad N.W., Ulrich M. (Eds): Pseudomonas syringae pathovars and related pathogens – identification epidemiology and genomics. Springer, Dordrecht: 369-370.
155.
Schaafsma, A.W., Hooker, D.C., 2007. Climatic models to predict occurrence of Fusarium toxins in wheat and maize. Int. J. Food Microbiol. 119, 1-2, 116-25. https://doi.org/10.1016/j.ijfo....
156.
Schloss, P.D., Handelesman, J., 2006. Toward a census of bacteria in soil. PLoS Comput. Biol. 21. https://doi.org/10.1371/journa....
157.
Selesi, D., Pattis, I., Schmid, M., Kandeler, E., Hartmann, A., 2007. Quantification of bacterial RubisCO genes in soils by cbbL targeted real-time PCR. J. Microbiol. Methods 69, 497-503. https://doi.org/10.1016/j.mime....
158.
Selesi, D., Schmid, M., Hartmann, A., 2005. Diversity of green-like and Red-Like Ribulose-1, 5-Bisphosphate carboxylase /oxygenase large-subunit genes (cbbL) in differently managed agricultural soils. Appl. Environ. Microbiol. 71, 175-184. https://doi.org/10.1128/AEM.71....
159.
Shafi, J., Tian, H., Ji, M., 2017. Bacillus species as versatile weapons for plant pathogens: a review. Biotechnol Biotechnol Equip. 31, 3, 446-459. https://doi.org/10.1080/131028....
160.
Sharma K., 2011. Inorganic phosphate solubilization by fungi isolated from agriculture soil. J. Phytol. 3, 11-12.
161.
Siegieda, D., Panek, J., Frąc, M., 2023. Plant and soil health in organic strawberry farms – Greater importance of fungal trophic modes and networks than α-diversity of the mycobiome. Applied Soil Ecology 188, 104925. https://doi.org/10.1016/j.apso....
162.
Singh, J.S., 2015. Microbes: The chief ecological engineers in reinstating equilibrium in degraded ecosystems. Agric. Ecosyst. Environ. 203, 80-82. https://doi.org/10.1016/j.agee....
163.
Smith, L.G., Kirk, G.J.D., Jones, P.J., Williams, A.G., 2019. The greenhouse gas impacts of converting food production in England and Wales to organic methods. Nat. Communic. 10, 4641, https://doi.org/10.1038/s41467....
164.
Soussana, J.-F., Loiseau, P., Vuichard, N., Ceschia, E., Balesdent, J., Chevallier, T., et al., 2004. Carbon cycling and sequestration opportunities in temperate grasslands. Soil Use Manag. 20, 219-230.
165.
Staley, C., Breuillin-sessoms, F., Wang, P., Kaiser, T., Venterea, R.T., Sadowsky, M.J., 2018. Urea amendment decreases microbial diversity and selects for specific nitrifying strains in eight contrasting agricultural soils. Front. Microbiol. 9, 1-13. https://doi.org/10.3389/fmicb.....
166.
Suciu, N., Vasileiadis, S., Puglisi, E., Pertile, G., Tourna, M., Karas, P.Α., et al., 2019. Azadirachtin and trifloxystrobin had no inhibitory effects on key soil microbial functions even at high dose rates. Appl. Soil Ecol. 137, 29-38. https://doi.org/10.1016/j.apso....
167.
Suman, J., Rakshit, A., Ogireddy, S.D., Singh, S., Gupta, C., Chandrakala, J., 2022. Microbiome as a key player in sustainable agriculture and human health. Front. Soil Sci. 2, 821589. https://doi.org/10.3389/fsoil.....
168.
Suryanarayanan, T.S., Govindarajulu, M.B., Thirumalai, E., Reddy, M.S., Money, N.P., 2011. Agni’s fungi: heat-resistant spores from the Western Ghats, southern India. Fungal Biol. 115, 9, 833-8. https://doi.org/10.1016/j.funb....
169.
Taş N., Prestat E., Wang S., Wu Y., Ulrich C., Kneafsey T., et al., 2018. Landscape topography structures the soil microbiome in arctic polygonal tundra. Nat. Communic. 9, 777, https://doi.org/10.1038/s41467....
170.
Torbati M., Arzanlou M., Abed-Ashtiani F., Golmohammadi H., 2019. Occurrence of fruit rot on cornelian cherry caused by Pilidium lythri in Iran. Crop Prot. 125, 104884. https://doi.org/10.1016/j.crop....
171.
Tripathi, B.M., Kim, H.M., Jung, J.Y., Nam, S., Ju, H.T., Kim, M., et al., 2019. Distinct taxonomic and functional profiles of the microbiome associated with different soil horizons of a moist tussock Tundra in Alaska. Front. Microbiol. 10, 1442. https://doi.org/10.3389/fmicb.....
172.
Uauy, C., Brevis, J.C., Chen, X., Khan, I., Jackson, L., Chicaiza, O., et al., 2005. High-temperature adult-plant (htap) stripe rust resistance gene Yr36 from Triticum turgidum ssp. dicoccoides is closely linked to the grain protein content locus Gpc-B1. Theoret. Appl. Genet. 112, 1, 97-105. https://doi.org/10.1007/s00122....
173.
UNESCO, 2003. The United Nations decade for education for sustainable development. United Nations Educational, Scientific, and Cultural Organization. Retrieved from http://portal.unesco.org/educa....
174.
Vasileiadis, S., Puglisi, E., Papadopoulou, E.S., Pertile, G., Suciu, N., Pappolla, R.A., et al., 2018. Blame it on the metabolite : 3,5-dichloroaniline rather than the parent compound is responsible for the decreasing diversity and function of soil microorganisms. Appl. Environ. Microbiol. 30, 84, 1-16. https://doi.org/10.1128/AEM.01....
175.
Venkat, K., 2012. Comparison of twelve organic and conventional farming systems: A life cycle greenhouse gas emissions perspective. J. Sust. Agric. 36, 620-649. https://doi.org/10.1080/104400....
176.
Vieira, A.F., Moura, M., Silva, L., 2021. Soil metagenomics in grasslands and forests – A review and bibliometric analysis. Appl. Soil Ecol. 167, 104047. https://doi.org/10.1016/j.apso....
177.
Vijayabharathi, R., Sathya, A., Gopalakrishnan, S., 2016. A renaissance in plant growth-promoting and biocontrol agents by endophytes. In: Singh, D.P. (Ed.), Microbial Inoculants in Sustainable Agricultural Productivity. Springer, India, 37-60. https://doi.org/10.1007/978-81....
178.
Vleeshouwers, L.M., Verhagen, A., 2002. Carbon emission and sequestration by agricultural land use: a model study for Europe. Global Change Biol. 8, 6, 519-530. https://doi.org/10.1046/j.1365....
179.
Walkiewicz, A., Kalinichenko, K., Kubaczyński, A., Brzezińska, M., Bieganowski, A., 2020. Usage of biochar for mitigation of CO2 emission and enhancement of CH4 consumption in forest and orchard Haplic Luvisol (Siltic) soils. Appl. Soil Ecol. 156, 103711. https://doi.org/10.1016/j.apso....
180.
Wang, G., Bei, S., Li J., Bao, X., Zhang, J., Schultz, P.A., et al., 2021. Soil microbial legacy drives crop diversity advantage: Linking ecological plant-soil feedback with agricultural intercropping. J. Appl. Ecol. 58, 3, 496-506. https://doi.org/10.1111/1365-2....
181.
Wang, X., Jia, Z., Liang, L., Yang, B., Ding, R., Nie, J., et al., 2016. Impacts of manure application on soil environment, rainfall use efficiency and crop biomass under dryland farming. Sci. Rep. 6, 20994. https://doi.org/10.1038/srep20....
182.
Ważny, R., Jędrzejczyk, R.J., Rozpądek, P., Domka, A., Turnau, K., 2022. Biotization of highbush blueberry with ericoid mycorrhizal and endophytic fungi improves plant growth and vitality. Appl. Microbiol. Biotechnol. 106, 12, 4775-4786. https://doi.org/10.1007/s00253....
183.
Webb, K.M., Oña, I., Bai, J., Garrett, K.A., Mew, T., Vera Cruz, C.M., et al., 2010. A benefit of high temperature: increased effectiveness of a rice bacterial blight disease resistance gene. New Phytologist. 185, 2, 568-76. https://doi.org/10.1111/j.1469....
184.
Weingart, H., Stubner, S., Schenk, A., Ullrich, M.S., 2004. Impact of temperature on in planta expression of genes involved in synthesis of the Pseudomonas syringae phytotoxin coronatine. Mol Plant Microbe Interact. 17:1095-1102.
185.
Yadav, A.N., Kour, D., Kaur, T., Devi, R., Yadav, A., Dikilitas, M., et al., 2021. Biodiversity, and biotechnological contribution of beneficial soil microbiomes for nutrient cycling, plant growth improvement and nutrient uptake. Biocat. Agricult. Biotechnol. 33, 102009, https://doi.org/10.1016/j.bcab....
186.
Yang, Y., Liu, H., Lv, J., 2022. Response of N2O emission and denitrification genes to different inorganic and organic amendments. Sci. Rep. 12, 3940. https://doi.org/10.1038/s41598....
187.
Zaborowska, M., Wyszkowska, J., Borowik, A., 2020. Soil microbiome response to contamination with bisphenol A, bisphenol F and bisphenol S. Int. J. Mol. Sci. 21, 3529. https://doi.org/10.3390/ijms21... www.mdpi.com/journal.
188.
Zhang, P., Chen, X., Wei, T., Yang, Z., Jia, Z., Yang, B., et al., 2016. Effects of straw incorporation on the soil nutrient contents, enzyme activities, and crop yield in a semiarid region of China. Soil Till. Res., 160, 65-72. https://doi.org/10.1016/j.stil....
189.
Zhou, G., Gao, S., Xu, C., Dou, F., Shimizu, K., Cao W., 2020. Rational utilization of leguminous green manure to mitigate methane emissions by influencing methanogenic and methanotrophic communities. Geoderma 361, 114071. https://doi.org/10.1016/j.geod....
Share
RELATED ARTICLE
| eISSN: | 2300-8725 |
| ISSN: | 0236-8722 |
We process personal data collected when visiting the website. The function of obtaining information about users and their behavior is carried out by voluntarily entered information in forms and saving cookies in end devices. Data, including cookies, are used to provide services, improve the user experience and to analyze the traffic in accordance with the Privacy policy. Data are also collected and processed by Google Analytics tool (more).
You can change cookies settings in your browser. Restricted use of cookies in the browser configuration may affect some functionalities of the website.
You can change cookies settings in your browser. Restricted use of cookies in the browser configuration may affect some functionalities of the website.
